The intensive use of agrochemicals in agriculture has been raised the concern about their potential effects on human health and the environment. In this way, regarding crop protection compounds a complex frameworks and restrictions had been established in several countries, particularly for compounds identified as endocrine disruptors. In Uruguay, the General Direction of Agricultural Services is the agency responsible for registry, but the authorization process does not consider the potential effects on endocrine system. Uruguay has significantly increased the use of crop protection compounds, of which several of them have been identified as endocrine disruptors and the environmental risks associated have not been studied. The aim of this study was to be bridging the gap between registry process and environmental protection policies. An eco-epidemiological analysis of the database of compounds imported in 2017, use guideline, national agricultural census as well as the public endocrine disruptor databases were carried out. Main class of crop protection compounds were ranked according to imported volumes and the top 10 of each class were contrasted with the disruptor databases. In function to recommended doses and geographical localization of the crops was identified the main hot spots associated to the use of agricultural compounds identified as endocrine disruptors.